Author:
V.S. Patil1*, S.J. Waghmare2, M.S. Kambale3, R.A. Karande2 and T.S. Koli1
Journal Name: Biological Forum – An International Journal, 16(7): 112-116, 2024
Address:
1M.Sc. Student, Plant Pathology Section, RCSM College of Agriculture, Kolhapur (Maharashtra), India.
2Assistant Professor, Plant Pathology Section, RCSM College of Agriculture, Kolhapur (Maharashtra), India.
3Assistant Professor, Agricultural Botany Section, RCSM College of Agriculture, Kolhapur (Maharashtra), India.
(Corresponding author: V.S. Patil*)
DOI: -
Onion is one of the most important commercial bulbous crops that grown for regular consumption. Zinc is an essential and important minor key element which makes significant contribution in various physiological and metabolic processes in plants. Inoculation of zinc solubilizing bacteria is recommended to overcome the zinc deficiency in plants and humans. Zinc solubilizing bacteria alone has been found to increase the bioavailability of native and applied zinc to plants. In the present investigations, out of twenty-three soil samples, six isolates of zinc solubilizing bacteria were obtained from different villages of Kolhapur District. All the isolates were identified on the basis of morphological, cultural, microscopic features and biochemical analysis. Most of the isolates showed variability in cell morphology i.e., rod and cocci. Colony colour and shapes also varied i.e., circular, round and irregular. In the biochemical analysis all the isolates showed positive results for catalase test and H2S production test except ZSB-3. All isolates showed positive results for starch hydrolysis, gelatine liquefaction and methyl red test.
zinc solubilizing bacteria, morphological, cultural and biochemical analysis.
Onion (Allium cepa L.) is one of the most important commercial bulbous crops cultivated extensively in world and belonging to Alliceae family (Hanelt, 1990). Onion is the queen of kitchen is one of the most important commercial crop not only in India but also in the world. Central Asia. It is primarily consumed for its unique flavour that enhance the flavour of other food (Randle, 2000). It is rich source of vitamin C and E and it has medicinal value also (Bosekeng, 2012). The edible portion of the bulb are enlarged leaf base and compact stem. Green onions also called scallions are eaten for their immature and green foliage. The chief constituent of the onion which is responsible for pungency due to allyl propyl disulphide (Baloch et al., 2014). As per the final estimates of 2020-21 the production of onion is reported to be 26.64 Million tonnes and out of this Maharashtra produced 13.3 Million tonnes. Productivity of onion could be increased by the use of suitable varieties, balanced nutrition, water management and plant protection measures. Among the many constituents for the low productivity in onion imbalanced nutrition is the main factor. Plants require major (Nitrogen, Phosphorous and Potassium) and micronutrients viz., zinc, sulphur, magnesium, manganese, boron, copper, ferrous and molybdenum are the essential elements. Among these, zinc has great role in the fertilization program to achieve higher and sustainable yield (Singh and Tiwari 1996). Zinc makes significant contribution in various physiological and metabolic processes in plants. Zinc is indispensable element for proper plant growth which can be reverted back to available form by zinc solubilizing bacteria (Saravanan et al., 2003). The availability of zinc in soil and its concentration in plant tissues are generally affected by composition of microbial population present rhizosphere region of soil (Dotaniya and Meena 2015). Zinc solubilizing bacteria alone has been found to increase the bioavailability of native and applied zinc to plants. Thus, the management of biological fertilizers containing zinc solubilizing bacteria can be an effective alternative to chemical fertilizers. Application of zinc increased the growth and yield of onion (Phor et al., 1995). Zinc solubilizing biofertilizer conserves soil fertility and environment (Ilyas et al., 2018). It plays an important role in maintaining fertility and increasing productivity (Sindhu et al., 2017).
Total 23 soil samples were collected from rhizosphere of onion crop from different regions of Kolhapur District. All 6 isolates were identified as zinc solubilizing bacteria on the basis of morphological studies (cell morphology, Gram reaction and stain colour), cultural characteristics (colony colour and colony shape). Cultural studies were carried out on Kings B media containing ZnO and ZnCO3, Rovira and Bunt media containing ZnO and ZnCO3 and Nutrient Agar media containing ZnO and ZnCO3. The individual colonies of zinc solubilizing bacteria were examined for colony morphology, cell shape and gram reaction as per standard procedure given by Barthalomew and Mittewar (1950). Biochemical characterization (catalase, starch hydrolysis, gelatin liquefaction, acid production from carbohydrate, methyl red and H2S production test).
Isolation of zinc solubilizing bacteria from rhizosphere of onion. Soil was carefully removed from roots region and kept in fresh plastic bags after completion of labelling and tagging. Samples were preserved in refrigerator at 4°C temperature for further use. The isolation was carried out by using serial dilution and pour plate technique using Kings B media.
Biochemical analysis. For the identification of zinc solubilizing bacterial isolates, biochemical tests such as catalase, starch hydrolysis, gelatine liquefaction, acid production from carbohydrate, methyl red and H2S production tests were carried out.
Catalase test. The sterilized glass slides were taken and using sterile loop a loopful of freshly incubated culture transfer on sterilized glass slide. After add drop of H2O2 (3% Hydrogen peroxide) on it. The occurrence of gas bubbles was shows positive result for catalase activity.
Starch hydrolysis test. Starch agar media were prepared and pour into sterilized petri plates under aseptic condition. After solidification of media plates were inoculated with efficient zinc solubilising bacterial isolate and incubate at 28 ± 2°C for 48 hr. The incubated plates were flooded with lugol’s iodine solution.
Gelatine liquefaction. The sterilized nutrient gelation deep tubes were inoculated with efficient zinc solubilizing bacterial isolate and tubes were incubated at 28±2°C for 48 hr. The tubes were kept in a refrigerator at 4°C for 30 minutes. The tubes with cultures that remained liquefied were taken as positive and those solidified on refrigeration were taken as negative for the test.
Methyl red test. Fresh isolates of ZSB were inoculated in the test tubes containing Kings B medium under aseptic conditions and were inoculated at 28°C for 48 hours. 5 ml of methyl red solution was added to each after the incubation period. The formation of red colour in the broth indicated the positive result and the formation of yellow colour indicated negative result for the test.
Serial dilution and pour plate technique One gram of soil sample was added in 9 ml of distilled water blank. After that tenfold serial dilutions were prepared up to 107 dilutions then one ml of aliquot was taken from 104 to 106 in sterilized petri plates with aliquot and poured with sterilized Kings B medium and mixed gently. After solidification of medium, plates were incubated at 28 ± 2°C for 4 to 5 days. Later on, morphological, cultural, microscopic features and biochemical analysis were carried out.
Morphological characteristics Morphological characteristics such as cell morphology, Gram reaction and stain colour were studied. Gram staining was carried out as per the standard procedure described by Cappuccino and Sherman (2001).
Formation of clear zone around colony indicates starch positive test.
Acid production from carbohydrates Test tubes containing peptone, bromocresol purple along with growth factors and medium C of dye firstly sterilized and then
inoculated with ZSB and kept for 7 days at 28°C in incubator. The bromocresol purple is a pH indicator and turn yellow indicates the presence of acid.
H2S production test. Bacterial cultures are grown in a suitable medium in a tube containing sulphur compounds like thiosulphate. Then the inoculated culture is incubated for 24-48 hours at room temperature. The presence of black precipitate indicates positive test and yellow colour indicates negative test.
During isolation, out of twenty-three rhizospheric region of soil samples collected from onion crop, six isolates of zinc solubilizing bacteria (ZSB) were obtained. Isolation was done on Kings B medium (Savaranan et al., 2003) by adopting enrichment culture technique. Bacterial colonies were obtained after 5 to 7 days of incubation at 27±2°C. During isolation, out of 23 soil samples, 6 isolates were obtained. One each isolate of zinc solubilizing bacteria was obtained from different villages viz., Murgud (Kagal teh.), Jakhale (Panhala teh), Bastawade (Kagal teh.), Rashiwade (Radhanagari teh), Kodoli (Panhala teh.) and Bhadagoan (Gadhinglaj teh.). Two isolates of zinc solubilizing bacteria were obtained from Kagal and Panhala and designated as ZSB-1, ZSB-3, ZSB-2 and ZSB-5 respectively. Moreover, one isolate each from Radhanagari, Gadhinglaj and designated as ZSB-4 and ZSB-6 respectively.
Out of total six obtained isolates four isolates were Gram negative whereas remaining two are Gram positive. The obtained isolates viz., ZSB-1, ZSB-3, ZSB-4, ZSB-5 were Gram negative and ZSB-2, ZSB-6 were Gram positive. Most of the zinc solubilizing bacterial isolates were cocci shaped viz., ZSB-3, ZSB-4, ZSB-5 and ZSB- 6 except ZSB-1 and ZSB-2 with rod shape. The results are in conformity with Cappuccino and Shermen (2001); Kumar et al. (2012).
Name of Tehsil | Name of village | No. of sample | Obtained isolates of ZSB | Latitude | Longitude | Altitude (m) |
1. Kagal | 1. Murgud | 1 | ZSB-1 | 16.3942° | 74.1901° | 556 |
2. Chimgoan | 1 | — | 16.7296° | 74.5285° | 547 | |
3. Bhadgoan | 1 | — | 16.7154° | 74.4996° | 549 | |
4. Bastawade | 1 | ZSB-3 | 16.7240° | 74. 5373° | 564 | |
5. Hamidwada | 1 | — | 16.8350° | 74.4924° | 558 | |
2. Gadhinglaj | 1. Aurnal | 1 | — | 16.2110° | 74.3368° | 623 |
2. Bhadagoan | 1 | ZSB-6 | 16.2552° | 74.3734° | 627 | |
3. Gijawane | 1 | — | 16.9240° | 74.0348° | 625 | |
4. Gadhinglaj | 1 | — | 16.8542° | 74.2059° | 635 | |
3. Karveer | 1. Pachagoan | 1 | — | 16.6780° | 74.2694° | 554 |
2.Bele | 1 | — | 16.5571° | 74.1328° | 546 | |
3. Mudshingi | 1 | — | 16.7084° | 74.3528° | 541 | |
4. Ispurli | 1 | — | 16.5608° | 74.1798° | 559 | |
4.Panhala | 1. Jakhale | 1 | ZSB-2 | 16.8382° | 74.1957° | 674 |
2. Panhala | 1 | — | 16.8107° | 74.1181° | 689 | |
3. Kodoli | 1 | ZSB-5 | 16.8752° | 74.1902° | 695 | |
5. Shirol | 1.Yadrav | 1 | — | 16.5202° | 74.72600 | 543 |
2. Jambhali | 1 | — | 16.7195° | 74.5317° | 547 | |
3.Haroli | 1 | — | 16.7240° | 74. 5141° | 539 | |
4. Bastawad | 1 | — | 16.7787° | 74.5544° | 544 | |
6. Radhanagari | 1. Saravade | 1 | — | 16.1419° | 74.1034° | 570 |
2. Rashiwade | 1 | ZSB-4 | 16.5476° | 74.1020° | 564 |
Table 2: Morphological characteristics of Zinc solubilizing bacterial isolates.
Sr. No. | Obtained isolates | Cell morphology | Gram reaction | Stain colour |
1. | ZSB-1 | Rod | -Ve | Pink |
2. | ZSB-2 | Rod | +Ve | Purple |
3. | ZSB-3 | Cocci | -Ve | Pink |
4. | ZSB-4 | Cocci | -Ve | Pink |
5. | ZSB-5 | Cocci | -Ve | Pink |
6. | ZSB-6 | Cocci | +Ve | Purple |
Table 3: Cultural characteristics of isolates of Zinc solubilizing bacteria.
Media | Obtained isolates | Colour | Shape |
Kings B media containing ZnO | ZSB-1 | Creamy white | Irregular |
ZSB-2 | Transparent white | Round | |
ZSB-3 | Milky white | Circular | |
ZSB-4 | Opaque white | Circular | |
ZSB-5 | Milky white | Round | |
ZSB-6 | Milky white | Irregular | |
Rovira and Bunt media containing ZnO | ZSB-1 | Opaque white | Irregular |
ZSB-2 | Transparent white | Round | |
ZSB-3 | Creamy white | Round | |
ZSB-4 | Milky white | Round | |
ZSB-5 | White | Round | |
ZSB-6 | Transparent white | Irregular | |
Nutrient agar media containing ZnO | ZSB-1 | Milky white | Round |
ZSB-2 | Milky white | Round | |
ZSB-3 | White | Round | |
ZSB-4 | Milky white | Round | |
ZSB-5 | White | Round | |
ZSB-6 | Milky white | Round | |
Kings B media containing ZnCO3 | ZSB-1 | White | Round |
ZSB-2 | White | Round | |
ZSB-3 | — | — | |
ZSB-4 | White | Round | |
ZSB-5 | — | — | |
ZSB-6 | White | Round | |
Rovira and Bunt media containing ZnCO3 | ZSB-1 | — | — |
ZSB-2 | — | — | |
ZSB-3 | — | — | |
ZSB-4 | — | — | |
ZSB-5 | — | — | |
ZSB-6 | — | — | |
NA media containing ZnCO3 | ZSB-1 | Transparent white | Circular |
ZSB-2 | Transparent white | Circular | |
ZSB-3 | Milky white | Round | |
ZSB-4 | Milky white | Round | |
ZSB-5 | White | Round | |
ZSB-6 | Opaque white | Round |
The cultural characteristics of zinc solubilizing bacteria (ZSB) in Table 4 revealed that, Kings B media containing ZnO showed, ZSB-1 isolate colony was creamy white whereas ZSB-3, ZSB-5 and ZSB-6 isolates colonies were milky white. The isolate ZSB-2 has transparent while colonies whereas ZSB-4 was opaque white. Rovira and Bunt media containing ZnO showed, ZSB-1 colony isolate was opaque white, ZSB-2 and ZSB-6 isolates colonies were transparent white, ZSB-3 isolate was creamy white, ZSB-4 isolate was milky white while ZSB-5 isolate colony was white. NA media containing ZnO showed ZSB-1, ZSB-2, ZSB-4 and ZSB-6 isolates colonies were milky white whereas ZSB-3 and ZSB-5 isolates colonies were white. Kings B media containing ZnCO3 showed, ZSB-1, ZSB-22, ZSB-4 and ZSB-6 isolates colonies were white in colour. No growth was observed on Rovira and Bunt media containing ZnCO3. Nutrient agar (NA) media containing ZnCO3 showed ZSB-1, ZSB-2 isolate colonies were transparent white whereas ZSB-3, ZSB-4 isolates colonies were milky white, ZSB-5 isolate colony was white and ZSB-6 isolate colony was opaque white. The findings of present investigation are in confirmation with Chandra Shekhar et al. (2019); Tamboli (2019).
Based on morphological, cultural characteristics (colour and shape), microscopic observations, biochemical characterization and solubilization index, the efficient zinc solubilizing bacterial isolates were identified as Bacillus sp. and Pseudomonas sp. however designated as ZSB-1 and ZSB-2 respectively.
Table 4: Biochemical characterization of isolates of Zinc solubilizing bacteria.
Sr. No. | Biochemical test | ZSB-1 | ZSB-2 | ZSB-3 | ZSB-4 | ZSB-5 | ZSB-6 |
1. | Catalase test | + | + | – | + | + | + |
2. | Starch hydrolysis | + | + | + | + | + | + |
3. | H2S production test | + | + | – | + | + | + |
4. | Gelatin liquefaction | + | + | + | + | + | + |
5. | Acid production from carbohydrates | + | + | – | + | + | – |
6. | Methyl-red test | + | + | + | + | + | + |
All the obtained isolates showed positive results for catalase test except ZSB-3. All the obtained isolates showed positive result for starch hydrolysis test. Except ZSB-3, all other isolates showed positive result for H2S production test.
Gelatine liquefaction test results showed positive results for all the obtained isolates. ZSB-1, ZSB-2 ZSB-4 and ZSB-5 gave positive results whereas ZSB-3 and ZSB-6 showed negative results for acid production from carbohydrates. In case of methyl red test all the obtained isolates showed positive results. The results of biochemical tests were noticed to be similar with Cappuccino and Shermen (2001); Kumar et al. (2012).
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